This minor release includes an improvement to the 'Quick Start' Help and a modification to the user interface tab switching logic. Details are otherwise as below for SimSoup version 0.6.
Source Distribution: SimSoup Version 0.61 - Source distribution
Documentation: The SimSoup Guide - Version 1.1
This release includes demo scenarios including designed Molecule Types that support the operation of a metabolic memory system based on that described in the paper "SimSoup: Molecules Designed for Switchable Autocatalytic Memory" produced for ECAL 2013 (Twelfth European Conference on the Synthesis and Simulation of Living Systems). A 'methane combustion' scenario is also included.
The release also includes comprehensive documentation ("the SimSoup Guide") covering:
SimSoup 0.6 will run on most modern Linux distrubutions. It has been tested on:
Source Distribution: SimSoup Version 0.6 - Source distribution
Documentation: The SimSoup Guide - Version 1.1
This release fixes a problem in usage of the Boost Graph Library that affected SimSoup on OpenSuse 11.4
SimSoup 0.53 Beta has been tested on:
Source: SimSoup Version 0.53 Beta - Source distribution
This release fixes problems that were occurring running SimSoup on OpenSuse and Ubuntu
SimSoup 0.52 Beta has been tested on:
Source: SimSoup Version 0.52 Beta - Source distribution
This release incorporates some improvements to the installation process.
SimSoup 0.51 Beta has been tested on:
Source: SimSoup Version 0.51 Beta - Source distribution
This Beta version incorporates the additional bond perturbation functionality that was developed for the paper "Non-Template Molecules Designed For Open-Ended Evolution" that was published in the proceedings of ECAL 2011 (Eleventh European Conference on the Synthesis and Simulation of Living Systems).
A few usability issues remain; a couple of the displays are not complete (eg with values shown as 'Unknown'), and there is no user manual yet. Hence the beta status.
This is a source distribution. In case of any issues building SimSoup, please send queries to the email address on the home page of this website.
Source: SimSoup Version 0.5 Beta - Source distribution
Each distribution has installation instructions in the INSTALL file in the top level directory. Installation instructions are also available on the SimSoup->Installation page on this website.
The distributions include a User Manual, also available here:-
User Manual: SimSoup User Manual
SimSoup Version 0.3 for Linux: i386 Executable - Open Suse 10.0 (4.5 Mb Gzipped Tar)
SimSoup Version 0.3 for Linux: i386 Executable - Suse 9.1 and 9.2 (4.5 Mb Gzipped Tar)
Source Code for SimSoup Version 0.2 - 922 Kb Gzipped Tar
SimSoup Version 0.1 - Prototype for Linux: i386 Executable - 3.1Mb Gzipped Tar
SimSoup
Version 0.1 - Prototype for Windows: Executable - 1Mb Zip
file
Source Code for SimSoup Version 0.1 - Prototype for Linux: 92Kb Gzipped Tar